Institute of Physics, Academia Sinica

Polymer Physics and Complex Fluids Group

Publications

2021
56. T.-H. Yen, C.-H. Lin and Y.-L. Chen* (2021)
Effects of Gas Adsorption and Surface Conditions on Interfacial Nanobubbles
Langmuir 37, 2759
2019
53. Seonghyun Lee, Yelin Lee, Yongkyun Kim, Cong Wang, Jungyul Park, Gun Young Jung, Yenglong Chen, Rakwoo Chang, Shuji Ikeda, Hiroshi Sugiyama, Kyubong Jo* (2019)
Nanochannel-Confined TAMRA-Polypyrrole Stained DNA Stretching by Varying the Ionic Strength from Micromolar to Millimolar Concentrations
Polymers 11, 15
2018
52. Y.-R. Pan, C.-C. Chen, Y.-T. Chan, H.-J. Wang, F.-T. Chien, Y.-L. Chen, J.-L. Liu, and M.-H. Yang* (2018)
STAT3-coordinated migration facilitates the dissemination of diffuse of large B-cell lymphomas
Nature Comm. 9, 3696
51. Yi-Xian Chen, Yeng-Long Chen*, and Tsu-Hsu Yen* (2018)
Investigating Interfacial Effects on Surface Nanobubbles without Pinning Using Molecular Dynamics Simulation
Langmuir, 34, 15360
50. C.-W. Lee, Y.-L. Chiang, J.-T. Liu, Y.-X. Chen, C.-H. Lee,* Y.-L. Chen,* and I.-S. Hwang* (2018)
Emerging Roles of Air Gases in Lipid Bilayers
Small, 14, 1802133
48. Y.-F. Wu, P.-S. Hsu*, C.-S. Tsai, K. Pan, and Y.-L. Chen* (2018)
Significantly increased low shear rate viscosity, blood elastic modulus, and RBC aggregation in adults following cardiac surgery
Scientific Report, 8, 7173
47. T.-A. Lee, W.-H. Liao, Y.-F. Wu, Y.-L. Chen, and Y.-C. Tung* (2018)
Electrofluidic Circuit-Based Microfluidic Viscometer for Analysis of Newtonian and Non-Newtonian Liquids under Different Temperatures
Analytical Chemistry, 90, 2317
2017
46. C.-T. Liao, Y.-F. Wu, W. Chien, J.R. Huang and Y.-L. Chen* (2017)
Modeling shear-induced particle ordering and deformation in a dense soft particle suspension.
J. Phys. Condens. Matter 29, 435101
45. W. Chien and Y.-L. Chen* (2017)
Confinement, curvature, and attractive interaction effects on polymer surface adsorption.
J. Chem. Phys. 147, 064901.
44. F.-T. Chien, P.-K. Lin, W. Chien, C.H. Hung, M.H. Yu, C.-F-. Chou and Y.-L. Chen* (2017)
Crowding-facilitated macromolecular transport in attractive micropost arrays.
Sci. Rep. 7, 1340.
2016
43. W. Chien and Y.-L. Chen* (2016)
Abnormal polymer transport in crowded attractive micropost arrays.
Soft Matter, 12, 7969.
41. S.H. Au, B.D. Storey, J.C. Moore, Q. Tang,Y.-L. Chen, S. Javaid, A.F. Sarioglu, R. J. Sullivan, M.W. Madden, R. O'Keefe, D.M. Langenau, D.A. Haber, S. Maheswaran, S.L. Stott and M. Toner* (2016)
Clusters of circulating tumor cells traverse capillary-sized vessels.
Proc. Natl. Acad. Sci. U.S.A., 113, 4947
2015
40. Z Peng*, Y.-L. Chen, H. Lu, Z. Pan, and H.-C. Chang (2015)
Mesoscale simulations of two model systems in biophysics: from red blood cells to DNAs
Comp. Particle Mech. 1.
39. G.-J. Liao, F.-T. Chien, D. Luzhbin, and Y.-L. Chen* (2015)
Entropic attraction: Polymer compaction and expansion induced by nano-particles in confinement.
J. Chem. Phys., 142, 17490
2014
38. Z. Liu, J. Liu, R. Wang*, and Y.-L. Chen* (2014)
Conformation-dependent translocation of a star polymer through a nanochannel
Biomicrofluidics, 8, 054107
37. J. Lee, S. Kim, H. Jeong, G.Y. Jung, R. Chang*, Y.-L. Chen*, and K. Jo* (2014)
Nanoslit confined DNA at low ionic strengths
ACS Macro Lett., 3, 926
35. Y.-L. Chen* (2014)
Inertia- and deformation-driven migration of a soft particle in confined shear and Poiseuille flow
RSC Advances, 4, 17908. DOI:10.1039/C4RA00837E
34. Y.-L. Chen*, Y.-H. Lin, J.-F. Chang, and P.K. Lin (2014)
Dynamics and Conformation of Semiflexible Polymers in Strong Quasi-1D and -2D Confinement
Macromolecules, 47, 1199. DOI: 10.1021/ma401923t
2013
33. Y.-L. Chen* (2013)
Electro-entropic excluded volume effects on DNA looping and relaxation in nanochannels
Biomicrofluidics, 7, 054119. DOI: 10.1063/1.4826157
2012
32. P.-K. Lin, C.-C. Hsieh, Y.-L. Chen*, and C.-F. Chou* (2012)
Topological and Ionic Strength Influences on Confined ds-DNA Properties in Nanoslits
Macromolecules, 45, 2920. DOI: 10.1021/ma202695e
31. J.-W. Yeh, A. Taloni, Y.-L. Chen, and C.F. Chou* (2012)
Single molecule tug-of-war of DNA at micro-nanofluidic interfaces
Nano Letters, 12, 1597. DOI: 10.1021/nl2045292
30. I. Stachiv, A. Fedorchenko, and Y.-L. Chen* (2012)
Mass detection by means of the vibrating nanomechanical resonators
Appl. Phys. Lett., 100, 093110. DOI: 10.1063/1.3691195
2011
28. P.-K. Lin, J.-F. Chang, C.-H. Wei, P.H. Tsao, W.S. Fann, and Y.-L. Chen* (2011)
Partial hydrodynamic screening of confined linear and circular double-stranded DNA dynamics
Phys. Rev. E, 84, 031917
27. A. Hammack, Y.-L. Chen, and J. Kreft Pearce* (2011)
Role of dissolved salts in thermophoresis of DNA: Lattice Boltzmann based simulations
Phys. Rev. E, 83, 031915 (2011)
2010
26. Y.-L. Chen*, P.-K. Lin, and C.F. Chou (2010)
Generalized Force-Extension Relation for Wormlike Chains in Slit Confinement
Macromolecules, 43, 10204
25. C.W. Hsu and Y.-L. Chen* (2010)
Migration and fractionation of deformable particles in microchannel
J. Chem. Phys. 133, 034906
2009
24. S. Ramakrishnan*, S. A. Shah, L. Ruggeri, Y. L. Chen, K. S. Schweizer, and C. F. Zukoski (2009)
Collective Diffusion in Colloid-Polymer Suspensions: Relative Role of Thermodynamics and Hydrodynamics
Langmuir, 25, 10507
23. K. Jo*, Y.-L. Chen, J.J. de Pablo, D.C. Schwartz (2009)
Elongation and migration of single DNA molecules in microchannels using oscillatory shear flows
Lab Chip, 9, 2348
22. P.-K. Lin, K.-H. Lin, C.-C. Fu, K.-C. Lee, P.-K. Wei, W.-W Pai, P.-H. Tsao, Y.-L. Chen*, and W. S. Fann* (2009)
One-Dimensional Dynamics and Transport of DNA Molecules in a Quasi-Two-Dimensional Nanoslit
Macromolecules, 42, 1770
2008
21. R. Wang*, Y.-L. Chen, J. Hu, and G. Xue (2008)
Depletion-induced surface alignment of asymmetric diblock copolymer in selective solvents
J. Chem. Phys, 129, 044907
20. J.K. Kreft, Y.-L. Chen*, and H.-C. Chang, (2008)
Conformation and trapping rate of DNA at a convergent stagnation point
Phys. Rev. E, 77, 030801R
2007
19. Y.-L. Chen*, H. Ma, M.D. Graham, J.J. de Pablo, (2007)
Modeling DNA in confinement: A comparison between Brownian dynamics and lattice Boltzmann method
Macromolecules 40, 5978
18. J. Kreft and Y.-L. Chen*, (2007)
Thermal diffusion by Brownian motion induced fluid stress
Phys. Rev. E 76, 021912
17. P.-K. Lin, C.C. Fu Y.-L. Chen*, Y.R. Chen, P.K. Wei, C.H. Kuan, and W.S. Fann* (2007)
Static Conformation and Dynamics of Single DNA Molecules Confined in Nanoslits
Phys. Rev. E, 76, 011806
2006
16. R. Wang*, Z. Jiang, Y.-L. Chen, G. Xue, (2006)
Surface-induced phase transition of asymmetric diblock copolymer in selective solvents
J. Phys. Chem. B, 110, 22726.
2005
15. M. Doxastakis, Y.-L. Chen , J.J. de Pablo* (2005)
Potential of mean force between two small colloids in a solution of nonadsorbing polymers
J. Chem. Phys, 123, 034901.
14. Y.-L. Chen, K. Jo, D.C. Schwartz*, M.D. Graham*, J.J. de Pablo* (2005)
DNA Molecules in Microfluidic Oscillatory Flow
Macromolecules, 38, 6680.
13. Y.-L. Chen, V. Kobelev, K.S. Schweizer* (2005)
Barrier Hopping, Viscous Flow, and Kinetic Gelation in Nanoparticle-Polymer Suspensions
Phys. Rev. E, 71, 041450.
2004
12. Y.-L. Chen, M.D. Graham, J.J. de Pablo, G.C. Randall, M. Gupta, and P.S. Doyle
Conformation and Dynamics of Single DNA in Parallel-Plate Slit Microchannels
Phys. Rev. E, 70, 060901(R).
11. S. Ramakrishnan, Y.-L. Chen, K.S. Schweizer*, and C.F. Zukoski* (2004)
Elasticity and clustering in concentrated depletion gels
Phys. Rev. E, 70, 040401(R).
10. M. Doxastakis, Y.-L. Chen, O. Guzman, and J.J. de Pablo* (2004)
Polymer-Particle Mixtures: Depletion and Packing Effects
J. Chem. Phys., 120, 9335, 2004.
9. Y.-L. Chen and K.S. Schweizer* (2004)
Microscopic Theory of Gelation and Elasticity in Polymer-Particle Suspensions
J. Chem. Phys., 120, 7212.
2003
7. S.A. Shah, Y.-L. Chen, K.S. Schweizer*, and C.F. Zukoski* (2003)
Viscoelasticity and Rheology of Depletion Flocculated Gels and Fluids
J. Chem. Phys., 119, 8747.
6. S.A. Shah, Y.-L. Chen, S. Ramakrishnan, K.S. Schweizer*, and C.F. Zukoski* (2003)
Microstructure of Dense Colloid-Polymer Suspensions and Gels
J. Phys.: Condens. Matter, 15, 4751.
5. Y.-L. Chen, M. Fuchs, and K.S. Schweizer* (2003)
Phase Separation in Colloid-Polymer Suspensions: Role of Solvent Quality
Physical Mesh, and Nonlocal Entropic Repulsion, J. Chem. Phys, 118, 3880.
4. S.A. Shah, S. Ramakrishnan, Y.-L. Chen, K.S. Schweizer*, and C.F. Zukoski* (2003)
Scattering Studies of the Structure of Colloid-Polymer Suspensions and Gels
Langmuir, 19, 5128.
3. S.A. Shah, Y.-L. Chen, C. F. Zukoski*, and K.S. Schweizer* (2003)
Phase Behavior and Concentration Fluctuations in Suspensions of Hard Spheres and Near Ideal Polymers
J. Chem. Phys., 118, 3350.
2002
2. Y.-L. Chen and K.S. Schweizer* (2002)
Collective Structure and Dynamics in Dense Colloid-Rod Polymer Suspension
Langmuir, 18, 7354.
1. Y.-L. Chen and K.S. Schweizer* (2002)
Depletion Interaction In Suspensions of Spheres And Rod Polymers
J. Chem. Phys., 117, 1351.