Polymer Physics and Complex Fluids Group

61. F.-W. Wang, Y.-J. Chen, J.-R. Huang, and Y.-L. Chen* (2022)

Probing the stoichiometry dependence of enzyme-catalyzed junction zone network formation in aiyu pectin gel via a reaction kinetics model

Polymers, 14, 4631

60. C.-T. Liao, A.-J. Liu, and Y.-L. Chen* (2022)

Flow-induced "waltzing" red blood cells: microstructural reorganization and the corresponding rheological response

Sci. Adv. in press

59. T.-H. Yen* and Y.-L. Chen* (2022)

Analysis of Gas Nano-Clusters in Water using All-atom Molecular Dynamics

Langmuir, in press

58. P.M. Wu*, C.-Y. Chung, Y.-R. Chen, Y.H.Su, K.S. Chang-Liao, P.W. Chi, T. Paul, Y.-J. Chen, Y.-L. Chen, S. F. Wang, P. Badgujar, B.-N. Chen, C.-L. Cheng and M.-K. Wu (2022)

Vibrational and electrochemical studies of pectin- a candidate towards environmental friendly lithium-ion battery development

PNAS Nexus, 1, 1

57. F.-W. Wang, M. Geri, Y.-J. Chen, J.-R. Huang, G.H. McKinley and Y.-L. Chen* (2022)

Rheo-chemistry of Gelation in Aiyu (Fig) Jelly

Food Hydrocolloids 123, 107001

56. T.-H. Yen, C.-H. Lin and Y.-L. Chen* (2021)

Effects of Gas Adsorption and Surface Conditions on Interfacial Nanobubbles

Langmuir 37, 2759

55. C.-T. Liao and Y.-L. Chen* (2021)

Rich phase transitions in strongly confined polymer-nanoparticle mixtures: Nematic ordering, crystallization, and liquid-liquid phase separation

J. Chem. Phys. 154, 024901

54. C.-T. Liao and Y.-L. Chen* (2019)

Shear-induced non-monotonic viscosity dependence for model red blood cell suspensions in microvessels

Biomicrofluidics 13, 064115

53. Seonghyun Lee, Yelin Lee, Yongkyun Kim, Cong Wang, Jungyul Park, Gun Young Jung, Yenglong Chen, Rakwoo Chang, Shuji Ikeda, Hiroshi Sugiyama, Kyubong Jo* (2019)

Nanochannel-Confined TAMRA-Polypyrrole Stained DNA Stretching by Varying the Ionic Strength from Micromolar to Millimolar Concentrations

Polymers 11, 15

52. Y.-R. Pan, C.-C. Chen, Y.-T. Chan, H.-J. Wang, F.-T. Chien, Y.-L. Chen, J.-L. Liu, and M.-H. Yang* (2018)

STAT3-coordinated migration facilitates the dissemination of diffuse of large B-cell lymphomas

Nature Comm. 9, 3696

51. Yi-Xian Chen, Yeng-Long Chen*, and Tsu-Hsu Yen* (2018)

Investigating Interfacial Effects on Surface Nanobubbles without Pinning Using Molecular Dynamics Simulation

Langmuir, 34, 15360

50. C.-W. Lee, Y.-L. Chiang, J.-T. Liu, Y.-X. Chen, C.-H. Lee,* Y.-L. Chen,* and I.-S. Hwang* (2018)

Emerging Roles of Air Gases in Lipid Bilayers

Small, 14, 1802133

49. S. Roy, D. Luzhbin, and Y.-L. Chen* (2018)

Investigation of nematic to smectic phase transition and dynamical properties of strongly confined semiflexible polymers using Langevin dynamics

Soft Matter, 14, 7382

48. Y.-F. Wu, P.-S. Hsu*, C.-S. Tsai, K. Pan, and Y.-L. Chen* (2018)

Significantly increased low shear rate viscosity, blood elastic modulus, and RBC aggregation in adults following cardiac surgery

Scientific Report, 8, 7173

47. T.-A. Lee, W.-H. Liao, Y.-F. Wu, Y.-L. Chen, and Y.-C. Tung* (2018)

Electrofluidic Circuit-Based Microfluidic Viscometer for Analysis of Newtonian and Non-Newtonian Liquids under Different Temperatures

Analytical Chemistry, 90, 2317

46. C.-T. Liao, Y.-F. Wu, W. Chien, J.R. Huang and Y.-L. Chen* (2017)

Modeling shear-induced particle ordering and deformation in a dense soft particle suspension.

J. Phys. Condens. Matter 29, 435101

45. W. Chien and Y.-L. Chen* (2017)

Confinement, curvature, and attractive interaction effects on polymer surface adsorption.

J. Chem. Phys. 147, 064901.

44. F.-T. Chien, P.-K. Lin, W. Chien, C.H. Hung, M.H. Yu, C.-F-. Chou and Y.-L. Chen* (2017)

Crowding-facilitated macromolecular transport in attractive micropost arrays.

Sci. Rep. 7, 1340.

43. W. Chien and Y.-L. Chen* (2016)

Abnormal polymer transport in crowded attractive micropost arrays.

Soft Matter, 12, 7969.

42. D. Luzhbin and Y.-L. Chen* (2016)

Shifting the Isotropic-Nematic Transition in Very Strongly Confined Semiflexible Polymer Solutions.

Macromolecules, 49, 6139

41. S.H. Au, B.D. Storey, J.C. Moore, Q. Tang,Y.-L. Chen, S. Javaid, A.F. Sarioglu, R. J. Sullivan, M.W. Madden, R. O'Keefe, D.M. Langenau, D.A. Haber, S. Maheswaran, S.L. Stott and M. Toner* (2016)

Clusters of circulating tumor cells traverse capillary-sized vessels.

Proc. Natl. Acad. Sci. U.S.A., 113, 4947

40. Z Peng*, Y.-L. Chen, H. Lu, Z. Pan, and H.-C. Chang (2015)

Mesoscale simulations of two model systems in biophysics: from red blood cells to DNAs

Comp. Particle Mech. 1.

39. G.-J. Liao, F.-T. Chien, D. Luzhbin, and Y.-L. Chen* (2015)

Entropic attraction: Polymer compaction and expansion induced by nano-particles in confinement.

J. Chem. Phys., 142, 17490

38. Z. Liu, J. Liu, R. Wang*, and Y.-L. Chen* (2014)

Conformation-dependent translocation of a star polymer through a nanochannel

Biomicrofluidics, 8, 054107

37. J. Lee, S. Kim, H. Jeong, G.Y. Jung, R. Chang*, Y.-L. Chen*, and K. Jo* (2014)

Nanoslit confined DNA at low ionic strengths

ACS Macro Lett., 3, 926

36. I. Stachiv*, J. Zapomel, Y.-L. Chen (2014)

Simultaneous determination of the elastic modulus and density / thickness of ultrathin films utilizing micro-/nanoresonators under applied axial force

J. Appl. Phys., 115, 12430

35. Y.-L. Chen* (2014)

Inertia- and deformation-driven migration of a soft particle in confined shear and Poiseuille flow

RSC Advances, 4, 17908. DOI:10.1039/C4RA00837E

34. Y.-L. Chen*, Y.-H. Lin, J.-F. Chang, and P.K. Lin (2014)

Dynamics and Conformation of Semiflexible Polymers in Strong Quasi-1D and -2D Confinement

Macromolecules, 47, 1199. DOI: 10.1021/ma401923t

33. Y.-L. Chen* (2013)

Electro-entropic excluded volume effects on DNA looping and relaxation in nanochannels

Biomicrofluidics, 7, 054119. DOI: 10.1063/1.4826157

32. P.-K. Lin, C.-C. Hsieh, Y.-L. Chen*, and C.-F. Chou* (2012)

Topological and Ionic Strength Influences on Confined ds-DNA Properties in Nanoslits

Macromolecules, 45, 2920. DOI: 10.1021/ma202695e

31. J.-W. Yeh, A. Taloni, Y.-L. Chen, and C.F. Chou* (2012)

Single molecule tug-of-war of DNA at micro-nanofluidic interfaces

Nano Letters, 12, 1597. DOI: 10.1021/nl2045292

30. I. Stachiv, A. Fedorchenko, and Y.-L. Chen* (2012)

Mass detection by means of the vibrating nanomechanical resonators

Appl. Phys. Lett., 100, 093110. DOI: 10.1063/1.3691195

29. G. Hegde, J.-F. Chang, Y.-L. Chen*, and R. Khare* (2011)

Conformation and diffusion behavior of ring polymers in solution : A comparison between molecular dynamics, multiparticle collision dynamics and lattice Boltzmann simulations

J. Chem. Phys., 135, 184901

28. P.-K. Lin, J.-F. Chang, C.-H. Wei, P.H. Tsao, W.S. Fann, and Y.-L. Chen* (2011)

Partial hydrodynamic screening of confined linear and circular double-stranded DNA dynamics

Phys. Rev. E, 84, 031917

27. A. Hammack, Y.-L. Chen, and J. Kreft Pearce* (2011)

Role of dissolved salts in thermophoresis of DNA: Lattice Boltzmann based simulations

Phys. Rev. E, 83, 031915 (2011)

26. Y.-L. Chen*, P.-K. Lin, and C.F. Chou (2010)

Generalized Force-Extension Relation for Wormlike Chains in Slit Confinement

Macromolecules, 43, 10204

25. C.W. Hsu and Y.-L. Chen* (2010)

Migration and fractionation of deformable particles in microchannel

J. Chem. Phys. 133, 034906

24. S. Ramakrishnan*, S. A. Shah, L. Ruggeri, Y. L. Chen, K. S. Schweizer, and C. F. Zukoski (2009)

Collective Diffusion in Colloid-Polymer Suspensions: Relative Role of Thermodynamics and Hydrodynamics

Langmuir, 25, 10507

23. K. Jo*, Y.-L. Chen, J.J. de Pablo, D.C. Schwartz (2009)

Elongation and migration of single DNA molecules in microchannels using oscillatory shear flows

Lab Chip, 9, 2348

22. P.-K. Lin, K.-H. Lin, C.-C. Fu, K.-C. Lee, P.-K. Wei, W.-W Pai, P.-H. Tsao, Y.-L. Chen*, and W. S. Fann* (2009)

One-Dimensional Dynamics and Transport of DNA Molecules in a Quasi-Two-Dimensional Nanoslit

Macromolecules, 42, 1770

21. R. Wang*, Y.-L. Chen, J. Hu, and G. Xue (2008)

Depletion-induced surface alignment of asymmetric diblock copolymer in selective solvents

J. Chem. Phys, 129, 044907

20. J.K. Kreft, Y.-L. Chen*, and H.-C. Chang, (2008)

Conformation and trapping rate of DNA at a convergent stagnation point

Phys. Rev. E, 77, 030801R

19. Y.-L. Chen*, H. Ma, M.D. Graham, J.J. de Pablo, (2007)

Modeling DNA in confinement: A comparison between Brownian dynamics and lattice Boltzmann method

Macromolecules 40, 5978

18. J. Kreft and Y.-L. Chen*, (2007)

Thermal diffusion by Brownian motion induced fluid stress

Phys. Rev. E 76, 021912

17. P.-K. Lin, C.C. Fu Y.-L. Chen*, Y.R. Chen, P.K. Wei, C.H. Kuan, and W.S. Fann* (2007)

Static Conformation and Dynamics of Single DNA Molecules Confined in Nanoslits

Phys. Rev. E, 76, 011806

16. R. Wang*, Z. Jiang, Y.-L. Chen, G. Xue, (2006)

Surface-induced phase transition of asymmetric diblock copolymer in selective solvents

J. Phys. Chem. B, 110, 22726.

15. M. Doxastakis, Y.-L. Chen , J.J. de Pablo* (2005)

Potential of mean force between two small colloids in a solution of nonadsorbing polymers

J. Chem. Phys, 123, 034901.

14. Y.-L. Chen, K. Jo, D.C. Schwartz*, M.D. Graham*, J.J. de Pablo* (2005)

DNA Molecules in Microfluidic Oscillatory Flow

Macromolecules, 38, 6680.

13. Y.-L. Chen, V. Kobelev, K.S. Schweizer* (2005)

Barrier Hopping, Viscous Flow, and Kinetic Gelation in Nanoparticle-Polymer Suspensions

Phys. Rev. E, 71, 041450.

12. Y.-L. Chen, M.D. Graham, J.J. de Pablo, G.C. Randall, M. Gupta, and P.S. Doyle

Conformation and Dynamics of Single DNA in Parallel-Plate Slit Microchannels

Phys. Rev. E, 70, 060901(R).

11. S. Ramakrishnan, Y.-L. Chen, K.S. Schweizer*, and C.F. Zukoski* (2004)

Elasticity and clustering in concentrated depletion gels

Phys. Rev. E, 70, 040401(R).

10. M. Doxastakis, Y.-L. Chen, O. Guzman, and J.J. de Pablo* (2004)

Polymer-Particle Mixtures: Depletion and Packing Effects

J. Chem. Phys., 120, 9335, 2004.

9. Y.-L. Chen and K.S. Schweizer* (2004)

Microscopic Theory of Gelation and Elasticity in Polymer-Particle Suspensions

J. Chem. Phys., 120, 7212.

8. Y.-L. Chen and K.S. Schweizer* (2004)

Liquid State Theory of Structure, Thermodynamics, and Phase Separation in Suspensions of Rod Polymers and Hard Spheres

J. Phys. Chem.: B, 108, 6687.

7. S.A. Shah, Y.-L. Chen, K.S. Schweizer*, and C.F. Zukoski* (2003)

Viscoelasticity and Rheology of Depletion Flocculated Gels and Fluids

J. Chem. Phys., 119, 8747.

6. S.A. Shah, Y.-L. Chen, S. Ramakrishnan, K.S. Schweizer*, and C.F. Zukoski* (2003)

Microstructure of Dense Colloid-Polymer Suspensions and Gels

J. Phys.: Condens. Matter, 15, 4751.

5. Y.-L. Chen, M. Fuchs, and K.S. Schweizer* (2003)

Phase Separation in Colloid-Polymer Suspensions: Role of Solvent Quality

Physical Mesh, and Nonlocal Entropic Repulsion, J. Chem. Phys, 118, 3880.

4. S.A. Shah, S. Ramakrishnan, Y.-L. Chen, K.S. Schweizer*, and C.F. Zukoski* (2003)

Scattering Studies of the Structure of Colloid-Polymer Suspensions and Gels

Langmuir, 19, 5128.

3. S.A. Shah, Y.-L. Chen, C. F. Zukoski*, and K.S. Schweizer* (2003)

Phase Behavior and Concentration Fluctuations in Suspensions of Hard Spheres and Near Ideal Polymers

J. Chem. Phys., 118, 3350.

2. Y.-L. Chen and K.S. Schweizer* (2002)

Collective Structure and Dynamics in Dense Colloid-Rod Polymer Suspension

Langmuir, 18, 7354.

1. Y.-L. Chen and K.S. Schweizer* (2002)

Depletion Interaction In Suspensions of Spheres And Rod Polymers

J. Chem. Phys., 117, 1351.

Institute of Physics, Academia Sinica

Polymer Physics and Complex Fluids Group

Publications